Skip to Content

Your Journey Starts Here,

NGS DATA !

                     NGS DATA ?

Generating NGS data has become routine. Simple, even. Making sense of it has not. Making sense of even the simplest NGS run often means a long wait for attention from the bioinformatics department, which is overwhelmed with routine requests. However it can take weeks, or months, to reach the top of the list. When you eventually get your results and think of follow-on questions, you have to wait again. Meanwhile, NGS data piles up.

Instead, analyze your NGS data yourself. Basepair is web-based NGS analysis with a user-friendly interface. Run point-and-click workflows using industry standard tools, with your data securely stored on our hosted servers or your own. With clear explanations of your workflow elements, you’re in control every step of the way. And as an authorized user, your data, analysis method, and results are available to you, wherever  home, office or conference center. Best of all, you don't have to do any programming or coding.

The bioinformatics department benefits, too. With Basepair, they can relieve their organizations of the burden of the NGS data glut, and themselves of a backlog of routine requests. Custom workflows can be built and used, as usual, according to the organization's needs. When it's time to roll these workflows out to a wider audience of scientists, though, they can be containerized and executedusing the compute and storage resources in the organization’s own cloud account.

START RIGHT AWAY 

Get started clearing your bioinformatics backlog right away. No wait times or training courses required. Whether you have 100 or 100,000 samples to analyze, you can run your workflows with just a few clicks and have your results the same day, or even the same hour. Others have tried to put bioinformatics solutions on-line, making similar promises. But these solutions often come with an overly functional user interface that requires study and training. Usually, a “core” of users is identified, who must go and attend a lengthy training program. When they return, they soon find that the algorithms they learned to use aren’t really plug-and-play, and they often forget how the interface works the next time they have data. Sound familiar? With Basepair, there are no classes to attend, no course work to complete, and no coding or commands to remember. There’s no software to install, manage, or upgrade. We do all that. You become a data scientist, yourself, using Basepair to organize your own data, answer your own questions, and explore your genomic data on your own through interactive, dynamically generated visualizations and reports. Discover intriguing relationships in your data and collaborate with bioinformatics, asking informed questions.

ACHIEVE CLOUD ECONOMIES 

Cloud computing shouldn't slow you down. Yet many groups are finding that when they are required to use third-party cloud resources, their work is impeded by an increasing number of IT approvals and longer wait times. With Basepair, the platform manages everything for you. Consolidate analysis and storage in your own cloud account, and focus on the science while reducing cloud costs and approval delays. Seamlessly integrate with your cloud provider's analytical capabilities and enjoy the benefits of running everything through your own account. Maintain compliance without the hassle and expense of egressing data to new locations.

BENEFITS FOR KIT, ASSAY, AND TEST MAKERS 

We believe in empowering our partners to achieve success. That’s why we offer exclusive benefits to kit, assay, and test manufacturers who chose to partner with us. These benefits include an ability to bundle analysis at the point of sale, as well as real time access to kit usage and performance data. With our white-labeled program, you can direct your customers to a tailored bioinformatics solution, made just for your kit, assay, or test, with a point-and-click interface and easy-to-understand results. With comprehensive sales and service insights, you’ll be able to serve your customers better and build your brand. No longer is it acceptable to leave customers to figure things out on their own or to place a few files for them to find on GitHub. Instead, give your customers the satisfaction of completed results and beautiful graphics that appear under your brand and banner. When you partner with Basepair, your customer base is not limited to people with readily available in-house bioinformatics resources.  

Software Barriers To Personalized Medicine (PM)

Data Volume : Petabytes of genomic data, complex analysis & storage needs.

 Processing Power : Intensive compute requirements exceed local capacity .

Expertise Gap : Critical shortage of bioinformaticians, data scientists and cloud expertise .

Cost Barriers : High entry costs for commercial infrastructure and analysis tools.

Easy to Use Interface

 Most end users need < 5 minutes of training, get results in a few minutes

Interactive Filtering & Visualization  

Analysis results are available as interactive reports for R&D


Clinical Reporting 

From sequencing to PDF reports and everything in between

Accessioning – Sequencing Planning – Automated Data Ingestion – Sign Off - Reporting - Compliance

Deploy Custom Workflows

Streamlined Troubleshooting

Infra and workflow errors all in one place